Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954747.1_cds_XP_016493510.1_83615
CDS Infomation

[gene=LOC107812851] [db_xref=GeneID:107812851] [protein=pumilio homolog 24] [protein_id=XP_016493510.1] [location=join(34989..35222,35458..35511,36205..36266,36388..36469,36554..36677,36782..36941,37365..37515,37596..37709,37805..37876,38039..38089,38182..38232,38332..38439,38612..38803,39043..39117,39362..39609,39692..39803)] [gbkey=CDS]
Sequence

ATGGCAGCAAAACCCCAAAAAAGAGACGACTCCAAAAAGCGAAAGCATGCTCCGGCAGCC
GCCGTAGGGAAATCAACTCCCAAGAAACTGAAATCATCAACTGGTGTTCCCGCTAAGGTT
CTGAAGAAACCCCATAATAAATTTTCAAAGCCGGGAGATAAAAAGCAACAACCTAAGCCT
CATGTTGGGAACGACCCAGTTGATACCAAGCGACAGCGTCGTATACAGGCAAAGGAGCTA
GCTGAAGCAAGGAAGAAGAAGAGGAAGAAACATTACACATTGGAGCAAGAGCTCGCATCA
CTCTGGGAGAAGATGAGAACTCGAAATATTGCAAAAGAAGAAAGATCAAGATTGGTGAGT
GATGCCTTAAAGAAAATGAAAGGGAAGATCCCTGAAATAGCAAGCTCCCATGTTTCTTCT
CGTGTTCTTCAGACTTGTGTGAAACATTGTACACAAGATGAAAGAAATGCTGTGTTTGTG
GAGATTCGGCCTCATTTTATCACTCTTGCCAGCAATACCTATGCAGTTCATCTGGTGACA
AAGATGCTTGATACTGCATCCAAGGAGCAGCTGGCGGAGTTTATTTCCTCTCTTCATGGG
CATGTTGCTACTCTTCTTAGGCATANAAACGCAGCTCAGAAACAAACTCTTCTCATGGAG
CTGTATTCCCCCGAGCTTCAGTTGTTCAAAGATTTGACCTCACTGAAGGAAGCAAGAATA
GTTGATGTTATATCCACGCTAAAGCTTCAAAAGACTTCAGTCATACGGCACATGACTTCT
GTACTTCAGCCTATTTTGGAGAAAGGAATACTAGACCACTCAATTATACACAGGGCACTT
GTGGAGTACTTAACTATTGCTGATCAGTCTTCTGCTGCAGATGTAATCCAGCAGTTGTCA
AGTCCAGACCTTGTTCGAATGATTCACACAAAGGATGGATCCAGGATTGGGATATTTTGC
ATCAAACATGGGACTGCAAAGGACCGAAAGAAAATCATTAAAGGGATGAAAGACAAGGTC
GGAAAGATAGCTCGTGATAAATGTGGGACTTTGGTGCTTGTCTCCATCCTTTCGATTGTT
GATGACACGAAACTTTTAACAAAGGTTATCATTCGTGAGCTTGAAGGAATCCTTACGGAG
CTTCTTTCAGATCAGAATGGTAGACGCCCATTGTTGCAATTATTGCATCCAAATAGCTCA
CGCCATTTCAGCCCTGATGAGCTCGCAGCTCATGGTTCATCTGTTCCTTCTCTTGTCACC
AAGAGCCCCTCAGATGTAAATGTTGCATTGGATGAAGAAACAGAAGCTTCAGGGCTTGGT
GAAGCTGATAAAGAAGATAGCTGTGACACAGGTGCTGCAACCGACACCACCCAAAGTTCA
CATTTGAACGGAGGAGGAAAGAAGGATCCTCTTACAAGGCGGCAAGAATTATTGGTCAAC
AGTGGGCTAGCTGAGAAACTCATCGATGCATGTTGTGAGATGGCAGGGGAATTGCTAAAA
TCAAACTTTGGTAAAGAGGTCATTTATGAGGTCGCCATGGGAGGTGCAGACAGCATCCTT
CACGCAACTTTAGATGGAAAGTTGAAAACCTTACATGGTGCTATAGCAACTCTGGCAGCA
CATCCTAAAGTGGAGGAATCAGATAAAGAACATCTCCTTGAACACTTCCATTCTAGCAGG
ACCATCAGAAAACTGATCTTGGACTCCCCTTCTTTTGCTAGCACTTTGTATGAGAAAGCC
CTGAAAGGGAAATGCGCAATTTGGGCTCAAGGCCACAGTGCGAAAGTGATTAGTGCACTG
TTGGAAACTTCAAGTTCTAAGGTACACAAGCTTGTGAAGAAGGAAGTTCAGCCCTTGGTA
GATGATGGTATCCTCAAATTAGCCAAATGA

Peptide Sequence

PEP ID

XP_016493510.1
PEP Infomation

PREDICTED: pumilio homolog 24 [Nicotiana tabacum]
Sequence

MAAKPQKRDDSKKRKHAPAAAVGKSTPKKLKSSTGVPAKVLKKPHNKFSKPGDKKQQPKP
HVGNDPVDTKRQRRIQAKELAEARKKKRKKHYTLEQELASLWEKMRTRNIAKEERSRLVS
DALKKMKGKIPEIASSHVSSRVLQTCVKHCTQDERNAVFVEIRPHFITLASNTYAVHLVT
KMLDTASKEQLAEFISSLHGHVATLLRHXNAAQKQTLLMELYSPELQLFKDLTSLKEARI
VDVISTLKLQKTSVIRHMTSVLQPILEKGILDHSIIHRALVEYLTIADQSSAADVIQQLS
SPDLVRMIHTKDGSRIGIFCIKHGTAKDRKKIIKGMKDKVGKIARDKCGTLVLVSILSIV
DDTKLLTKVIIRELEGILTELLSDQNGRRPLLQLLHPNSSRHFSPDELAAHGSSVPSLVT
KSPSDVNVALDEETEASGLGEADKEDSCDTGAATDTTQSSHLNGGGKKDPLTRRQELLVN
SGLAEKLIDACCEMAGELLKSNFGKEVIYEVAMGGADSILHATLDGKLKTLHGAIATLAA
HPKVEESDKEHLLEHFHSSRTIRKLILDSPSFASTLYEKALKGKCAIWAQGHSAKVISAL
LETSSSKVHKLVKKEVQPLVDDGILKLAK

Transcript Sequence

Gene sequence data has not been registered.